PeaksFitΒΆ
peaksfit is gaussian fitting of ks distribution.
Parameters
Parameters |
Standards and instructions |
blockinfo |
Type: file | Default: - Output result of parameter bi |
mode |
Type: {median, average, total} | Default: median Different processing methods of ks value on collinearity block. |
tandem_length |
Type: int | Default: 200 If tandem=true, the maximum range of tandem influence. |
bins_number |
Type: int | Default: 200 Show the minimum length of a collinear block. |
fontsize |
Type: float | Default: 9 The fontsize of label in the plot. |
area |
Type: str Default: -1,3 Show the range of ks. |
figsize |
Type: int,int | Default: 10,10 Control the proportion of the size of the saved picture. |
savefig |
Type: {*. png,*. pdf, *. svg} | Default: *. png Save pictures support png, pdf, svg formats. |
Parameters
Use command to enter the folder wgdi -pf ? >> total.conf Take out the parameter file.:
[peaksfit]
blockinfo = block information
mode = median
bins_number = 200
ks_area = 0,10
fontsize = 9
area = 0,3
figsize = 10,6.18
savefig = saving image
Quick start
After the parameters are modified properly, then run wgdi -pf total.conf
Example
The original results are easily accessible at wgdi-example
